Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007323.1 Hibiscus syriacus cultivar Beakdansim tig00019543_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75889

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
288--389
33
2.9
35
83
14
131
29
4
33
32
1.79
11659--11744
13
7.2
12
72
22
58
29
3
37
30
1.74
11641--11745
36
2.9
36
95
1
185
28
4
36
30
1.78
22802--22836
9
3.5
10
88
11
54
0
14
0
85
0.59
22820--22881
27
2.3
27
76
15
65
8
16
12
62
1.52
22819--22871
27
1.9
27
85
11
72
5
15
15
64
1.47
22819--22877
28
2.1
28
81
12
68
8
15
13
62
1.53
22907--22931
11
2.3
11
100
0
50
16
36
8
40
1.77
30506--30532
13
2.1
13
100
0
54
33
29
0
37
1.58
32033--32074
19
2.2
19
87
8
59
35
7
14
42
1.73
52715--52748
16
2.1
17
89
10
54
11
23
0
64
1.26
55180--55218
19
2.0
20
90
10
62
41
5
12
41
1.65
55497--55538
16
2.6
16
96
0
75
28
11
33
26
1.92
56741--56780
19
2.0
20
90
4
64
65
0
15
20
1.28
57191--57242
19
2.6
21
84
6
72
48
5
13
32
1.66
59386--59416
13
2.4
13
100
0
62
25
25
9
38
1.86
60623--60689
18
3.8
18
78
9
75
7
14
2
74
1.16
60959--60998
19
2.0
20
90
4
64
65
0
15
20
1.28
66186--66248
18
3.9
16
79
20
69
74
4
17
3
1.12
66188--66248
26
2.4
25
72
10
61
75
3
18
3
1.08
66954--67006
24
2.2
24
86
6
72
37
13
24
24
1.91
67766--67824
29
2.0
30
86
3
84
28
8
10
52
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68698--68749
21
2.6
21
90
6
81
34
13
5
46
1.67
69057--69101
13
3.5
13
84
3
56
35
35
2
26
1.69
70398--70461
22
2.8
22
77
20
60
57
0
21
20
1.40
70421--70468
15
3.1
14
83
16
60
58
0
25
16
1.38
70417--70470
26
2.1
24
83
16
65
59
0
22
18
1.38
73579--73628
20
2.5
19
75
9
55
26
12
8
54
1.64
75577--75619
23
1.9
21
81
13
50
32
18
11
37
1.87

Tables:   1

The End!