Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007351.1 Hibiscus syriacus cultivar Beakdansim tig00019699_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  256012

Tables:   1   2   

This is table  2  of  2  ( 134 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239890--240000
53
2.1
54
82
3
134
72
3
18
5
1.18
239910--240009
27
3.7
27
91
2
148
72
4
18
6
1.22
239913--240029
53
2.2
52
82
8
139
74
2
17
5
1.12
242099--242982
55
16.1
54
85
4
1074
33
10
15
41
1.81
243090--243192
42
2.5
41
80
13
106
26
23
18
32
1.97
243509--243611
42
2.5
40
82
7
125
23
23
22
31
1.99
244573--245078
139
3.7
137
83
5
517
36
17
20
25
1.94
248829--249152
81
4.0
80
80
4
339
28
23
12
35
1.91
249102--249561
68
6.8
68
92
0
742
29
24
15
31
1.95
249770--249981
55
3.8
55
86
3
266
33
19
11
35
1.87
254451--254609
81
2.0
81
85
5
214
28
24
10
36
1.88
254541--254673
70
1.9
70
89
3
205
31
24
10
33
1.89
254691--255079
67
5.8
67
83
5
489
29
24
14
31
1.95
254691--255079
135
2.9
136
84
4
511
29
24
14
31
1.95

Tables:   1   2

The End!