Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007393.1 Hibiscus syriacus cultivar Beakdansim tig00019914_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57535

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1041--1073
17
1.9
17
93
0
57
15
24
42
18
1.88
1089--1137
19
2.6
19
87
6
64
24
32
28
14
1.94
1089--1155
9
7.0
9
79
12
62
28
31
25
14
1.95
1104--1155
19
2.7
20
90
3
79
30
30
23
15
1.95
7334--7410
31
2.5
31
80
2
91
27
31
27
14
1.95
7287--7410
63
2.0
63
80
6
144
26
28
28
16
1.97
8265--8302
7
5.4
7
93
0
67
26
26
28
18
1.98
11264--11419
65
2.4
65
91
3
244
29
24
19
26
1.99
12554--12657
48
2.2
47
92
1
172
62
1
4
30
1.27
18246--18384
21
6.8
20
70
8
73
35
25
17
20
1.95
18352--18560
20
10.4
20
86
2
222
38
24
17
19
1.93
19538--19694
19
8.7
19
80
16
199
45
17
21
15
1.85
19538--19694
72
2.2
72
94
2
271
45
17
21
15
1.85
19524--19688
53
3.1
52
83
14
214
46
18
21
13
1.84
19665--19780
53
2.2
52
84
3
151
18
22
18
39
1.92
19684--19801
53
2.2
53
93
3
211
13
23
17
44
1.85
19703--19801
20
5.4
19
81
14
127
14
22
17
46
1.83
19908--19944
14
2.6
14
91
0
65
45
21
0
32
1.52
20208--20313
20
5.3
20
84
4
124
18
18
26
35
1.95
31171--31295
65
1.9
65
98
0
241
24
9
19
46
1.79
34122--34282
64
2.5
63
85
6
200
35
19
19
25
1.95
34956--35019
30
2.1
30
85
0
83
18
18
28
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54368--54405
7
5.4
7
96
0
58
0
18
60
21
1.36
54372--54452
7
11.4
7
88
5
92
2
25
51
19
1.59
54459--54825
7
53.9
7
94
4
646
0
28
56
15
1.40
54831--57526
7
402.6
7
82
12
2909
10
3
44
41
1.54

Tables:   1

The End!