Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007454.1 Hibiscus syriacus cultivar Beakdansim tig00020410_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61698

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4093--4133
14
2.9
15
78
14
59
48
7
14
29
1.71
4420--4495
23
3.0
24
81
11
73
43
0
2
53
1.14
4455--4550
23
4.3
22
77
13
83
45
1
1
52
1.14
4513--4568
23
2.3
24
90
6
87
50
0
0
50
1.00
4635--4707
19
4.1
17
71
16
58
47
0
2
49
1.15
5075--5156
2
41.0
2
100
0
164
50
0
0
50
1.00
6821--6906
33
2.5
35
84
5
104
34
12
15
37
1.85
7525--7568
22
1.9
23
86
9
63
38
9
6
45
1.63
13726--13777
23
2.2
24
82
3
61
42
1
0
55
1.10
15605--15637
17
1.9
17
93
0
57
51
0
3
45
1.16
15719--15753
17
2.1
17
89
10
54
34
2
0
62
1.10
21300--21325
2
13.0
2
100
0
52
50
0
0
50
1.00
22078--22161
23
3.7
23
88
0
123
20
26
26
27
1.99
25587--25664
40
2.0
40
89
5
122
44
1
24
29
1.62
25640--25684
20
2.2
20
84
7
56
62
0
22
15
1.33
28704--28794
44
2.1
44
100
0
182
42
16
24
16
1.88
49941--50086
73
2.0
73
97
2
276
38
8
27
26
1.84
50346--50396
18
2.9
17
80
8
66
43
15
19
21
1.88
52724--52784
19
3.2
19
65
21
54
22
29
6
40
1.79
52715--52793
39
2.0
39
97
0
149
27
27
7
36
1.84
61306--61502
55
3.6
54
80
8
163
30
24
16
27
1.97
61299--61604
108
2.9
109
78
8
292
29
26
16
27
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61307--61668
51
6.9
51
81
7
311
28
26
16
28
1.97

Tables:   1

The End!