Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007463.1 Hibiscus syriacus cultivar Beakdansim tig00020468_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67294

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9153--9179
2
13.5
2
100
0
54
51
0
0
48
1.00
9453--9487
18
1.9
18
94
0
61
11
22
20
45
1.82
11877--11910
17
2.0
17
94
0
59
41
14
11
32
1.82
11898--11937
17
2.3
18
86
4
64
27
25
25
22
2.00
14736--14768
16
2.0
17
94
5
59
24
0
12
63
1.28
26161--26208
2
24.0
2
100
0
96
50
0
0
50
1.00
27513--27580
30
2.2
30
84
2
82
47
10
11
30
1.74
29828--29887
25
2.4
25
88
0
93
51
6
1
40
1.38
32302--32353
9
5.6
9
73
8
50
34
11
0
53
1.37
32300--32355
19
2.9
19
97
0
103
33
10
0
55
1.35
34768--34872
12
8.8
12
76
13
83
74
10
1
13
1.16
34768--34840
25
3.0
23
80
11
74
76
10
1
10
1.08
34767--34907
71
2.0
70
79
9
153
73
10
1
14
1.17
34825--34887
21
3.2
20
76
10
67
74
9
1
14
1.13
35063--35092
14
2.1
15
93
6
53
73
0
6
20
1.05
35250--35289
14
2.7
15
85
14
57
77
0
5
17
0.94
35573--35610
19
2.0
19
85
10
51
39
2
18
39
1.65
35517--35887
103
3.7
102
82
6
421
35
4
26
33
1.76
35826--36049
102
2.2
101
82
4
254
35
8
21
33
1.85
36343--36399
7
8.3
7
75
21
50
47
1
0
50
1.11
36377--36539
2
82.0
2
65
23
60
42
1
5
49
1.36
36437--36512
14
5.4
14
77
21
79
42
1
6
50
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36413--36540
43
3.0
42
86
7
161
43
1
6
48
1.37
36618--36721
28
3.9
27
71
15
90
42
4
7
45
1.54
36611--36743
67
2.0
65
82
8
162
42
6
7
44
1.57
37118--37158
2
20.5
2
100
0
82
48
0
0
51
1.00
38398--38451
2
27.0
2
96
0
99
0
48
0
51
1.00
38451--38501
2
25.5
2
100
0
102
49
0
0
50
1.00
40474--40528
24
2.3
23
84
12
67
16
7
14
61
1.54
41385--41429
12
3.8
12
76
5
56
31
24
22
22
1.99
41379--41464
23
3.7
24
84
1
95
26
22
23
27
1.99
41761--41791
16
1.9
16
100
0
62
6
12
22
58
1.58
46593--46674
29
2.8
29
94
1
137
32
14
9
42
1.79
51364--51445
29
2.8
29
94
1
137
32
14
9
42
1.79
54329--54385
3
19.0
3
100
0
114
0
66
0
33
0.92
59338--59369
17
1.9
17
93
6
57
28
3
12
56
1.51
59306--59390
43
2.0
44
95
2
154
36
2
8
52
1.44
64464--64494
16
1.9
16
93
0
53
25
9
12
51
1.70
64724--64816
3
31.0
3
100
0
186
0
33
0
66
0.92
64981--67294
2
1193.0
2
91
6
3890
0
0
51
48
1.00

Tables:   1

The End!