Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007475.1 Hibiscus syriacus cultivar Beakdansim tig00020550_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  249424

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205676--205715
21
1.9
21
85
10
55
35
10
2
52
1.48
207660--207838
75
2.3
76
84
4
225
21
23
32
22
1.98
213074--213104
2
15.5
2
100
0
62
51
0
0
48
1.00
213808--213848
2
20.5
2
100
0
82
48
0
0
51
1.00
222908--222951
22
2.0
22
81
4
52
40
0
13
45
1.44
230738--230906
91
1.9
91
89
0
266
36
13
11
39
1.80
230945--231034
45
2.0
44
95
2
162
32
12
15
40
1.84
232959--232991
16
1.9
17
88
11
50
36
0
3
60
1.12
232932--232993
17
3.8
17
70
23
51
33
0
1
64
1.03
234715--234789
33
2.3
33
97
0
141
10
56
20
13
1.66
235311--235384
34
2.2
33
79
13
80
22
2
13
60
1.45
235320--235396
34
2.2
36
82
13
99
22
1
16
59
1.44
235393--235473
35
2.3
32
77
20
83
25
7
9
56
1.58
237430--237454
11
2.3
11
100
0
50
48
0
0
52
1.00
237437--237472
17
2.0
19
89
10
58
41
2
0
55
1.14
240012--240051
21
1.9
21
89
0
62
10
25
40
25
1.86
240034--240092
20
2.8
21
79
10
66
18
23
35
22
1.96
240033--240092
23
2.7
23
77
10
72
18
23
36
21
1.95

Tables:   1   2

The End!