Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007494.1 Hibiscus syriacus cultivar Beakdansim tig00020729_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  265578

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
215510--215559
26
2.0
26
84
11
68
36
22
10
32
1.87
220311--220378
3
22.3
3
85
8
93
36
0
1
61
1.05
221498--221522
11
2.3
11
100
0
50
28
0
0
72
0.86
223731--223827
49
2.0
49
97
0
185
31
10
6
51
1.61
224501--224557
30
1.9
30
96
0
105
40
36
10
12
1.77
225871--225897
13
2.1
13
100
0
54
25
29
29
14
1.95
229209--229538
180
1.8
180
98
0
633
33
20
20
26
1.97
238736--238784
21
2.3
21
100
0
98
44
18
32
4
1.68
243113--243179
27
2.4
26
78
11
62
35
4
23
35
1.76
244432--244460
2
14.5
2
100
0
58
51
0
0
48
1.00
246771--246830
24
2.5
24
71
15
61
23
5
1
70
1.16
250693--250749
21
2.8
21
76
10
55
63
3
17
15
1.45
257316--257351
11
3.3
11
88
11
56
88
0
11
0
0.50
257320--257348
8
3.8
8
90
9
51
93
0
6
0
0.36
257317--257358
12
3.3
12
81
18
50
88
0
11
0
0.53
257317--257348
15
2.1
15
100
0
64
93
0
6
0
0.34
258077--258851
105
7.4
105
96
0
1433
33
24
17
24
1.96
260135--260246
30
3.6
29
67
17
73
25
22
14
38
1.91
260131--260256
63
2.0
63
96
0
234
24
21
16
37
1.94
261589--261650
31
2.0
32
90
3
99
22
16
14
46
1.83

Tables:   1   2

The End!