Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007554.1 Hibiscus syriacus cultivar Beakdansim tig00021215_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50901

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--299
33
5.6
33
77
11
197
15
31
35
17
1.91
88--307
106
2.1
105
96
0
404
15
33
34
16
1.91
384--465
32
2.6
32
94
0
137
17
28
34
20
1.95
193--768
168
3.4
169
94
2
1009
16
32
33
17
1.92
552--633
33
2.5
33
88
2
112
17
30
34
18
1.94
9082--9301
32
6.6
32
74
16
142
16
30
35
16
1.91
9082--9303
33
6.6
33
74
13
168
16
31
36
16
1.91
9066--9346
138
2.0
137
96
0
517
18
32
34
14
1.91
9197--9778
169
3.4
170
93
1
981
16
32
33
17
1.92
9388--9470
33
2.6
32
84
3
103
16
27
33
21
1.95
9557--9640
33
2.6
33
86
1
107
16
27
34
21
1.95
28218--28440
33
6.6
33
72
13
159
17
30
34
17
1.94
28199--28482
138
2.1
137
94
0
496
19
31
33
15
1.93
28334--28914
169
3.4
169
93
0
977
17
32
32
17
1.93
28524--28608
33
2.6
33
90
1
127
15
29
35
20
1.93
28687--28775
33
2.8
32
84
3
106
16
28
34
20
1.94
28149--28751
306
2.0
304
87
4
860
17
32
33
16
1.93
36750--36782
11
3.0
11
90
0
57
15
36
39
9
1.79
37172--37362
33
5.6
33
77
13
190
15
31
35
17
1.91
37151--37370
106
2.1
105
95
0
395
15
34
33
16
1.91
37439--37523
33
2.6
33
90
1
127
15
29
35
20
1.93
37256--37821
167
3.4
167
93
3
950
16
33
33
17
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37609--37690
33
2.5
33
88
2
112
17
30
34
18
1.94
50677--50860
32
5.4
32
73
14
154
16
31
35
16
1.91
50653--50870
105
2.1
104
94
2
384
16
33
33
16
1.91
50781--50862
33
2.5
33
92
2
130
15
30
36
17
1.91

Tables:   1

The End!