Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007589.1 Hibiscus syriacus cultivar Beakdansim tig00021849_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  223780

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210709--211338
269
2.3
268
87
2
904
25
18
30
25
1.98
211346--211432
29
3.0
29
76
6
104
49
12
16
21
1.78
211467--211613
29
5.0
29
80
4
152
39
12
13
34
1.82
212158--212275
36
3.4
35
67
25
83
41
6
20
31
1.78
212374--212566
103
1.9
103
81
4
239
37
11
15
35
1.84
212535--212678
36
4.1
35
84
9
177
41
10
17
30
1.83
212534--212675
71
2.0
71
87
5
207
40
10
18
30
1.84
214361--214447
12
7.1
11
71
22
50
1
13
5
79
0.97
214345--214420
35
2.2
34
80
19
86
0
10
7
81
0.87
214384--214447
26
2.4
26
82
15
78
1
14
6
78
1.02
214333--214447
23
4.7
24
74
20
80
1
13
7
76
1.08
214867--214931
23
2.8
23
97
0
121
15
33
18
32
1.92
218396--218486
2
46.5
2
93
4
159
48
0
0
51
1.00
220043--220122
3
27.0
3
80
7
92
63
2
1
32
1.15
221422--221454
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1   2

The End!