Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007593.1 Hibiscus syriacus cultivar Beakdansim tig00021889_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45995

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5586--5618
11
3.0
11
90
0
57
15
36
39
9
1.79
6006--6189
32
5.6
32
74
16
151
15
31
35
17
1.91
6009--6191
31
5.5
31
73
18
106
15
32
35
16
1.91
5984--6199
103
2.1
102
93
4
371
15
33
34
16
1.90
6276--6360
33
2.6
33
90
1
127
15
29
35
20
1.93
6087--6665
169
3.4
169
94
2
988
16
33
32
17
1.92
6440--6525
32
2.7
31
85
5
109
16
27
34
20
1.94
14565--14597
11
3.0
11
90
0
57
15
36
39
9
1.79
14985--15174
33
5.6
33
77
12
197
15
31
35
17
1.91
14966--15182
105
2.1
105
97
0
407
16
33
34
16
1.91
14915--15350
137
3.2
134
76
12
481
16
34
33
16
1.91
15258--15342
33
2.6
33
90
1
127
15
29
35
20
1.93
15069--15645
167
3.4
169
94
2
1018
16
33
33
17
1.92
15428--15509
33
2.5
33
88
2
112
17
30
34
18
1.94
28125--28157
11
3.0
11
90
0
57
15
36
39
9
1.79
28539--28729
33
5.6
33
77
11
197
15
31
35
17
1.91
28517--28737
106
2.1
106
97
0
415
15
33
34
16
1.91
28623--29201
169
3.4
169
95
1
1020
16
33
33
17
1.92
28814--28898
33
2.6
33
90
1
127
15
29
35
20
1.93
28986--29066
32
2.5
33
86
4
103
17
30
33
18
1.94
37070--37102
11
3.0
11
90
0
57
15
36
39
9
1.79
37490--37679
33
5.6
33
77
12
197
15
31
35
17
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37474--37687
105
2.0
106
96
0
394
16
32
34
16
1.91
37764--37848
33
2.6
33
90
1
127
15
29
35
20
1.93
37934--38015
33
2.5
33
88
2
112
17
30
34
18
1.94
37574--38150
169
3.4
168
95
1
1023
16
33
32
17
1.92

Tables:   1

The End!