Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007599.1 Hibiscus syriacus cultivar Beakdansim tig00021982_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42129

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
476--1022
160
3.4
160
86
5
700
32
18
18
31
1.94
474--1022
106
5.1
103
85
5
631
32
18
18
31
1.95
474--1022
54
10.3
53
86
5
657
32
18
18
31
1.95
495--1022
214
2.5
214
86
6
705
32
17
18
31
1.94
6422--6478
13
4.4
13
76
12
55
24
10
21
43
1.83
8158--8194
2
18.5
2
100
0
74
48
0
0
51
1.00
10296--10331
18
2.0
18
100
0
72
27
5
33
33
1.80
6915--13360
976
6.6
979
84
5
8244
36
13
20
29
1.90
13356--15995
974
2.7
975
87
2
3709
36
14
19
29
1.91
13356--15995
979
2.7
972
87
3
3726
36
14
19
29
1.91
15997--21908
980
6.0
980
87
2
8225
35
13
20
30
1.91
15997--39663
977
24.3
974
75
13
15923
36
13
20
29
1.91
21695--22125
217
2.0
218
90
2
688
39
6
22
32
1.78
21914--39663
976
18.5
975
79
11
17095
36
13
20
29
1.91
39682--42112
966
2.5
963
86
4
3356
36
13
19
30
1.91

Tables:   1

The End!