Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007674.1 Hibiscus syriacus cultivar Beakdansim tig00027602_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30987

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4097--4317
33
6.6
33
75
15
186
16
30
36
16
1.91
4074--4360
136
2.1
138
96
1
542
17
32
34
15
1.91
4212--4791
169
3.4
169
94
0
1011
16
32
33
16
1.92
4074--4453
136
2.8
136
88
5
468
16
32
34
16
1.91
4402--4486
33
2.6
33
88
1
118
16
30
35
17
1.92
4030--4621
305
1.9
304
88
4
899
16
32
34
16
1.91
4573--4654
33
2.5
33
84
2
103
17
29
34
19
1.94
13031--13250
32
6.6
32
76
14
176
16
30
35
16
1.91
13031--13252
33
6.6
33
76
14
195
16
31
36
16
1.91
13068--13282
65
3.2
65
72
18
231
17
30
36
14
1.90
13008--13295
137
2.1
138
97
0
551
17
32
34
15
1.91
13031--13727
169
4.1
170
90
4
1004
16
32
34
16
1.92
13008--13388
137
2.8
137
88
5
479
16
32
34
16
1.91
13337--13421
33
2.6
33
88
1
118
16
30
35
17
1.92
12964--13557
306
1.9
305
88
4
903
16
32
34
16
1.91
13509--13590
33
2.5
33
84
2
103
17
29
34
19
1.94
26637--26855
33
6.6
33
74
17
168
16
31
35
16
1.92
26617--26898
134
2.1
138
95
2
518
17
32
34
15
1.91
26617--26989
134
2.8
135
86
7
440
16
32
34
16
1.91
26752--27324
167
3.4
167
91
4
940
16
33
32
17
1.92
26939--27021
33
2.6
32
84
5
98
16
28
36
18
1.93

Tables:   1

The End!