Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007675.1 Hibiscus syriacus cultivar Beakdansim tig00027676_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33020

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4185--4217
11
3.0
11
90
0
57
15
36
39
9
1.79
4600--4789
33
5.6
33
77
11
188
15
32
34
17
1.92
4578--4797
105
2.1
106
95
0
397
15
34
33
16
1.91
4530--4963
137
3.2
133
75
15
447
15
34
32
16
1.91
4874--4955
33
2.6
32
86
7
107
14
30
34
20
1.93
4683--5254
167
3.4
170
92
4
952
16
33
33
17
1.92
5041--5122
33
2.5
33
88
2
112
17
30
34
18
1.94
13114--13146
11
3.0
11
90
0
57
15
36
39
9
1.79
13535--13725
33
5.6
33
77
11
197
15
31
35
17
1.91
13513--13733
106
2.1
106
97
0
415
15
33
34
16
1.91
13619--14197
168
3.4
169
96
0
1054
16
33
33
17
1.92
13809--13893
33
2.6
33
90
1
127
15
29
35
20
1.93
13980--14061
33
2.5
33
88
2
112
17
30
34
18
1.94
22443--22625
32
5.5
32
75
13
163
15
31
34
18
1.92
22425--22636
102
2.1
103
94
3
374
16
33
33
16
1.91
22527--23097
167
3.4
168
95
1
1006
16
33
32
17
1.92
22712--22796
33
2.6
33
90
1
127
15
29
35
20
1.93
22882--22962
32
2.5
33
86
4
103
17
30
33
18
1.94
31342--31531
33
5.6
33
77
12
197
15
31
35
17
1.91
31321--31539
105
2.1
105
97
0
411
15
33
33
16
1.91
31426--31999
168
3.4
167
94
1
983
16
33
32
17
1.92
31614--31699
33
2.6
34
88
3
122
15
29
34
20
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31782--31863
33
2.6
32
86
5
112
17
29
32
20
1.95

Tables:   1

The End!