Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007706.1 Hibiscus syriacus cultivar Beakdansim tig00109921_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  338066

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
275736--275774
3
13.0
3
94
0
69
33
2
0
64
1.08
281901--281967
22
3.0
22
93
2
116
29
28
23
17
1.97
282184--282243
30
2.0
31
90
3
95
33
23
6
36
1.81
282258--282329
29
2.5
29
93
0
117
38
12
9
38
1.76
282632--282801
66
2.6
64
85
6
205
17
25
27
28
1.98
283253--283294
21
2.0
22
86
13
61
59
0
35
4
1.19
288829--288880
23
2.3
23
90
3
79
30
26
25
17
1.97
288837--288882
23
2.0
23
95
4
85
26
28
26
19
1.99
289176--289247
29
2.5
29
93
0
117
38
12
9
38
1.76
289550--289700
68
2.2
68
88
2
216
17
26
28
27
1.97
289550--289722
67
2.6
67
85
5
215
17
26
27
28
1.98
298953--298992
16
2.5
15
84
11
53
42
0
0
57
0.98
298953--298992
17
2.4
16
88
12
55
42
0
0
57
0.98
309674--309722
2
24.5
2
100
0
98
48
0
0
51
1.00
311622--311653
17
1.9
16
93
6
55
0
59
31
9
1.29
311623--311670
20
2.4
20
82
0
60
2
58
29
10
1.43
319739--319948
75
2.8
77
86
3
291
24
32
23
20
1.98
325701--325763
21
2.9
21
83
4
63
20
38
23
17
1.93
328335--328545
76
2.8
77
88
2
300
24
32
23
19
1.98
329652--329839
92
2.0
93
83
6
238
30
23
15
30
1.95

Tables:   1   2

The End!