Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000772.1 Hibiscus syriacus cultivar Beakdansim tig00001497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82246

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--223
28
8.1
28
75
12
142
53
0
9
36
1.39
38--86
23
2.1
24
78
17
59
51
0
12
36
1.40
25--223
28
7.3
27
74
12
147
53
1
9
36
1.40
211--266
18
3.1
18
76
2
58
48
1
10
39
1.49
3199--3228
14
2.1
14
100
0
60
36
20
0
43
1.52
5385--5422
14
2.6
15
87
4
51
39
0
0
60
0.97
5380--5457
3
26.3
3
76
7
70
35
1
0
62
1.03
5387--5460
15
5.0
15
79
8
80
37
1
0
60
1.05
7018--7054
2
18.5
2
94
0
65
51
0
0
48
1.00
9126--9207
42
1.9
43
90
7
132
32
7
21
37
1.81
9286--9325
21
1.9
21
84
0
53
20
22
7
50
1.73
12219--12257
7
6.1
7
88
11
50
84
0
15
0
0.62
12220--12254
6
5.8
6
90
10
54
85
0
14
0
0.59
12228--12253
11
2.4
11
100
0
52
84
0
15
0
0.62
12221--12254
17
1.9
18
94
5
61
85
0
14
0
0.60
13762--14013
75
3.4
75
90
2
398
30
12
24
32
1.92
14884--15045
54
3.0
54
93
0
279
33
12
24
28
1.93
15416--15492
22
3.5
22
89
3
111
36
12
12
37
1.83
16128--16516
45
8.6
45
83
6
419
28
22
19
30
1.98
16122--16472
135
2.6
136
86
4
503
28
21
19
30
1.97
16570--17093
39
13.5
39
86
5
647
42
11
23
22
1.86
17259--17328
3
24.3
3
88
5
92
37
0
0
62
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18811--18859
24
2.1
23
85
11
64
61
14
0
24
1.33
29041--29090
24
2.1
24
85
7
66
60
14
2
24
1.45
30235--30306
34
2.1
34
84
0
90
31
8
6
52
1.58
33926--33954
14
2.0
15
93
6
51
17
6
0
75
1.01
33954--34030
3
26.7
3
77
12
81
32
1
1
64
1.09
33936--34031
49
2.0
49
85
4
131
30
3
1
65
1.15
41770--41801
12
2.7
12
100
0
64
34
50
0
15
1.45
44769--44818
22
2.3
21
80
6
55
22
4
8
66
1.35
45698--45747
20
2.4
21
83
9
59
28
2
2
68
1.12
49056--49087
15
2.1
15
94
0
55
25
18
9
46
1.79
56435--56474
14
2.9
13
82
10
53
82
0
15
2
0.77
56422--56473
16
3.2
17
84
13
65
82
0
11
5
0.82
56805--56873
18
3.5
19
82
7
77
31
10
5
52
1.59
58020--58464
113
4.0
113
91
2
729
38
13
18
29
1.89
58292--58336
24
1.9
23
82
13
56
51
6
24
17
1.70
58514--58578
17
3.3
20
66
20
55
43
7
20
29
1.79
58945--59024
3
27.7
3
82
12
105
32
1
0
66
1.00
59724--59749
10
2.6
10
100
0
52
0
23
61
15
1.33
61325--61366
3
14.0
3
85
9
59
64
4
0
30
1.14
61400--61439
2
20.5
2
94
5
73
50
0
0
50
1.00
63013--63056
3
14.7
3
100
0
88
68
0
0
31
0.90
75006--75046
21
1.9
22
90
5
66
24
17
19
39
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76554--76595
15
2.8
15
81
0
57
73
0
0
26
0.83
79435--79514
33
2.4
34
83
6
101
37
16
18
27
1.92

Tables:   1

The End!