Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007753.1 Hibiscus syriacus cultivar Beakdansim tig00110019_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  180811

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
173224--173376
19
8.7
19
75
22
156
15
21
17
45
1.86
173248--173390
34
4.2
32
78
18
141
13
21
18
46
1.84
173230--173322
49
1.9
48
97
2
177
15
22
17
45
1.85
173224--173376
68
2.2
70
89
6
231
15
21
17
45
1.86
173224--173409
68
2.7
68
84
8
202
15
21
18
44
1.86
173230--173409
49
3.5
49
76
12
139
14
21
18
45
1.85
174323--174488
20
8.6
20
81
10
166
21
18
24
36
1.95
174328--174475
37
3.8
39
85
9
153
21
18
24
35
1.96
174848--180811
7
877.1
7
92
6
10176
14
0
42
42
1.46

Tables:   1   2

The End!