Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007755.1 Hibiscus syriacus cultivar Beakdansim tig00110021_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  350557

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318716--318904
99
1.9
97
87
4
272
42
10
33
13
1.78
330245--330274
15
1.9
16
93
6
53
43
0
0
56
0.99
335834--335868
14
2.5
14
100
0
70
28
28
20
22
1.98
342186--342387
32
7.0
32
70
24
173
53
14
0
32
1.41
342226--342283
18
3.5
17
68
18
50
55
12
0
32
1.37
342291--342489
26
7.6
26
68
21
105
53
16
0
30
1.43
342254--343038
80
9.7
81
79
12
687
52
13
0
33
1.41
342186--343083
54
16.4
54
72
16
495
52
13
0
33
1.41
342252--343038
157
4.8
159
78
12
656
52
13
0
33
1.41
342496--342586
18
5.5
18
66
19
72
53
10
0
35
1.36
342491--342907
32
14.7
32
73
24
352
52
13
0
34
1.41
342585--342630
22
2.1
22
100
0
92
50
13
0
36
1.41
342590--342638
22
2.2
22
88
3
71
55
14
0
30
1.40
342778--342852
22
3.2
23
75
17
82
54
17
0
28
1.43
342891--342962
22
3.2
22
69
19
58
54
18
0
27
1.44
342963--343002
21
1.9
21
100
0
80
52
10
0
37
1.35
342984--343083
32
3.4
32
71
25
121
53
12
0
35
1.38
343018--343060
22
2.0
22
95
0
77
51
16
0
32
1.45
343063--343098
14
2.5
15
95
4
65
61
0
0
38
0.96
343193--343229
10
3.7
10
92
0
56
32
5
32
29
1.80
343691--343730
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1   2

The End!