Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007793.1 Hibiscus syriacus cultivar Beakdansim tig00110082_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  216588

Tables:   1   2   

This is table  2  of  2  ( 151 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134161--134230
23
3.0
23
93
0
113
55
12
11
20
1.67
137987--138045
31
1.9
31
96
0
109
57
10
15
16
1.64
138267--138316
25
2.0
25
92
0
82
64
12
2
22
1.37
143731--143766
12
3.0
12
91
0
63
33
5
25
36
1.79
143731--143799
24
2.8
26
83
12
85
37
5
24
31
1.79
143911--143944
15
2.3
15
89
0
50
14
14
29
41
1.86
151165--151200
9
4.1
9
85
7
56
63
2
0
33
1.08
151168--151201
17
2.0
17
100
0
68
58
5
0
35
1.22
159127--159169
17
2.7
15
82
13
50
30
2
9
58
1.42
164234--164281
11
4.2
12
75
19
50
43
2
0
54
1.12
164257--164295
19
2.1
19
90
0
60
51
0
0
48
1.00
164385--164482
27
3.5
29
67
21
84
50
2
3
44
1.29
164445--164488
22
2.0
23
86
4
63
54
2
2
40
1.25
164450--164493
22
2.0
22
82
8
54
54
2
2
40
1.25
180166--180600
112
3.9
112
91
2
696
28
23
17
30
1.97
180514--180646
48
2.8
50
86
6
170
30
21
15
32
1.95
180407--180757
159
2.2
158
89
3
519
29
20
17
33
1.95
180519--180646
46
2.7
49
86
7
167
31
19
16
32
1.94
180561--180867
111
2.7
112
91
2
474
29
20
16
33
1.95
180783--180917
48
2.8
48
87
3
193
26
23
17
31
1.97
182640--183497
429
2.0
429
98
0
1662
27
20
20
31
1.98
184597--184657
30
2.0
30
96
0
113
29
22
18
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
194225--194311
2
47.0
2
67
15
53
49
0
0
50
1.00
194240--194314
17
4.4
16
73
15
62
50
0
0
49
1.00
194257--194332
39
1.9
40
86
7
111
44
0
0
55
0.99
198090--198162
23
3.3
21
81
12
76
10
19
17
52
1.74
202596--202969
44
8.7
44
76
9
224
50
5
17
26
1.69
202645--202913
86
3.1
88
82
6
311
50
5
18
25
1.68
202833--202980
41
3.5
42
77
15
137
54
4
12
29
1.55
202677--202979
42
7.1
44
73
14
131
52
4
16
26
1.63
209245--209313
27
2.5
29
81
11
74
27
1
1
69
1.05

Tables:   1   2

The End!