Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007818.1 Hibiscus syriacus cultivar Beakdansim tig00110154_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  290479

Tables:   1   2   

This is table  2  of  2  ( 151 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255274--255310
18
2.1
18
89
0
56
32
5
10
51
1.60
255266--255318
24
2.2
24
86
0
70
35
3
13
47
1.61
255613--255699
39
2.2
39
95
0
156
47
19
16
17
1.83
255810--255859
20
2.5
20
87
6
75
26
12
34
28
1.92
256107--256157
24
2.2
24
82
10
61
33
5
3
56
1.42
257475--257506
16
2.0
16
93
0
55
50
9
6
34
1.60
257747--257816
20
3.5
20
90
0
104
44
18
21
15
1.87
258129--258200
20
3.6
20
84
3
101
15
18
20
45
1.85
258172--258314
57
2.5
57
93
4
252
18
18
21
41
1.91
258285--258337
20
2.7
20
87
0
79
11
18
22
47
1.81
260840--260876
16
2.3
17
81
13
51
56
2
5
35
1.36
261491--261531
3
14.0
3
92
5
66
68
0
2
29
1.03
261959--261989
16
1.9
16
100
0
62
12
16
0
70
1.16
262551--262600
3
16.7
3
100
0
100
32
0
0
68
0.90
267208--267239
15
2.1
16
94
5
57
6
25
18
50
1.70
267990--268023
16
2.1
16
94
0
59
32
26
8
32
1.87
270394--270681
81
3.6
79
75
5
238
32
18
16
32
1.93
273937--274234
43
7.0
42
79
5
258
25
20
17
36
1.94
273934--274234
86
3.5
84
80
3
307
25
20
17
36
1.94
273933--274218
129
2.2
128
81
5
310
25
20
18
35
1.95
274263--274376
43
2.6
43
84
2
138
29
20
14
35
1.93
278121--278170
2
25.0
2
100
0
100
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285768--285987
111
2.0
111
97
0
413
44
11
8
35
1.70
286050--286088
19
2.1
19
90
4
62
66
2
2
28
1.18
286292--286400
49
2.2
49
78
1
119
26
26
29
17
1.97
286430--286506
29
2.7
29
93
4
129
35
9
22
33
1.85
287490--287531
15
2.7
16
85
3
59
52
2
0
45
1.13
287751--287779
15
1.9
15
100
0
58
34
6
3
55
1.44
287934--287978
22
2.0
23
86
4
65
31
11
11
46
1.74
289522--289574
17
3.1
17
88
0
79
41
5
15
37
1.70
289580--289626
17
2.8
17
80
0
58
42
8
19
29
1.80

Tables:   1   2

The End!