Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000787.1 Hibiscus syriacus cultivar Beakdansim tig00001525_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  129779

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106582--106627
7
6.6
7
84
0
65
17
0
32
50
1.47
106572--106620
21
2.3
21
92
0
80
20
0
30
48
1.50
106572--106627
21
2.7
21
88
0
67
19
0
32
48
1.49
106772--106826
25
2.2
26
83
9
69
47
3
5
43
1.44
107126--107188
11
5.9
11
69
14
51
38
1
3
57
1.24
113429--113475
20
2.3
22
89
10
73
44
0
0
55
0.99
113959--113985
2
13.5
2
100
0
54
51
0
0
48
1.00
114830--114891
3
20.7
3
100
0
124
66
0
33
0
0.92
117058--117180
55
2.2
55
94
0
219
23
36
17
22
1.94
122870--122904
14
2.6
13
82
8
52
40
8
8
42
1.66
123568--123633
31
2.1
31
100
0
132
36
7
25
30
1.84
124000--124032
17
2.0
17
88
5
50
36
15
18
30
1.91
127926--127964
2
19.5
2
89
0
60
0
46
5
48
1.24
127926--127978
22
2.4
22
87
6
72
1
45
5
47
1.37
129012--129041
15
2.0
15
93
0
51
20
23
0
56
1.42

Tables:   1   2

The End!