Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007887.1 Hibiscus syriacus cultivar Beakdansim tig00110267_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  327798

Tables:   1   2   

This is table  2  of  2  ( 149 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
218703--218775
38
1.9
39
86
5
105
43
0
5
50
1.25
224867--224912
23
2.0
23
86
0
65
36
21
8
32
1.84
227557--227606
21
2.4
21
100
0
100
24
30
28
18
1.97
242288--242318
16
1.9
16
93
0
53
19
29
25
25
1.99
250481--251202
105
6.9
106
93
1
1195
23
18
24
33
1.97
261410--261453
20
2.2
20
88
8
63
72
2
6
18
1.17
262878--262922
20
2.4
19
81
7
56
71
4
4
20
1.21
275010--275089
20
3.8
21
76
12
74
25
33
25
16
1.95
275021--275089
21
3.2
21
76
11
68
23
37
23
15
1.93
284597--284755
63
2.5
62
85
2
192
32
19
21
27
1.97
285578--285779
102
2.0
103
88
1
298
26
14
22
36
1.93
285586--285805
102
2.1
102
84
2
271
27
13
22
36
1.91
285676--285976
149
2.0
149
90
1
471
26
14
22
36
1.93
285956--285998
22
2.0
22
85
0
59
23
25
25
25
2.00
289789--289826
19
2.0
20
94
5
69
28
15
28
26
1.96
289794--289952
63
2.5
62
86
2
201
31
19
22
27
1.98
290767--290982
102
2.1
102
86
0
308
25
14
23
36
1.93
290870--291170
149
2.0
148
91
0
485
26
15
22
35
1.94
291149--291209
23
2.7
23
94
2
106
21
26
26
26
1.99
294493--294788
134
2.3
126
83
7
346
27
22
16
33
1.95
295882--295956
2
36.0
2
80
7
69
50
4
4
41
1.40
300008--300099
30
3.1
31
77
14
104
36
4
13
45
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301673--301751
6
13.2
6
97
0
140
31
49
16
2
1.59
301749--301787
5
7.8
5
91
0
51
23
33
41
2
1.68
307657--307693
6
6.2
6
100
0
74
35
48
16
0
1.46
307691--307734
5
8.8
5
92
0
61
22
34
40
2
1.67
310555--310624
31
2.3
31
85
5
88
40
4
8
47
1.54
312646--312716
28
2.5
29
86
11
94
46
1
4
47
1.30
326092--326169
2
40.0
2
94
5
142
50
0
0
50
1.00

Tables:   1   2

The End!