Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007900.1 Hibiscus syriacus cultivar Beakdansim tig00110290_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  270466

Tables:   1   2   

This is table  2  of  2  ( 136 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234553--234585
17
1.9
17
93
0
57
45
12
6
36
1.66
234570--234638
22
3.0
22
73
19
77
47
7
4
40
1.51
234845--235265
12
30.7
13
70
20
190
43
9
2
43
1.51
234850--235265
26
16.7
26
74
11
334
43
9
2
43
1.51
234806--235323
124
4.2
124
96
0
916
44
9
2
43
1.50
238149--238207
26
2.3
24
78
16
64
40
3
8
47
1.51
239017--239079
28
2.2
30
91
5
103
57
11
0
31
1.34
239021--239086
28
2.4
28
85
10
98
56
10
0
33
1.34
239056--239104
21
2.3
21
85
3
71
53
16
0
30
1.43
239655--239727
20
3.3
20
67
26
58
24
47
9
17
1.77
239635--239727
46
2.0
46
100
0
186
23
47
10
18
1.80
243781--243953
85
2.0
84
91
1
274
31
16
6
45
1.73
244835--244869
18
1.9
18
88
0
52
40
5
0
54
1.24
253728--253783
30
1.9
29
86
13
80
51
12
3
32
1.56
253809--253838
15
2.0
15
100
0
60
46
0
6
46
1.29
266524--266554
15
2.1
15
100
0
62
45
0
12
41
1.42

Tables:   1   2

The End!