Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007920.1 Hibiscus syriacus cultivar Beakdansim tig00110324_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  328425

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255218--255310
31
3.1
30
83
6
116
26
10
3
59
1.46
255606--255659
27
2.0
27
89
10
83
33
0
0
66
0.92
255645--255698
21
2.6
20
77
8
54
42
7
0
50
1.30
258215--258254
17
2.4
17
100
0
80
27
37
15
20
1.92
282513--282550
19
2.2
18
86
13
53
76
0
21
2
0.91
282560--282631
19
3.7
19
77
15
76
80
1
13
4
0.92
282561--282652
9
9.9
9
71
17
55
79
1
14
5
0.96
282588--282640
24
2.2
24
90
6
81
81
0
13
5
0.86
282572--282652
30
2.8
30
73
22
93
79
0
14
6
0.92
283781--284192
51
8.0
51
94
1
662
29
15
27
27
1.96
283781--284299
102
5.0
102
89
3
664
29
15
26
28
1.96
283797--284299
51
9.6
56
90
3
257
29
15
26
28
1.96
284052--284301
55
4.6
55
81
8
219
29
16
24
29
1.97
284053--284333
55
5.1
55
79
9
195
28
16
23
31
1.96
284104--284333
111
2.1
111
80
9
247
28
16
22
32
1.95
303690--303863
30
5.6
29
70
12
96
36
20
20
23
1.95
303772--303872
30
3.4
30
83
0
112
34
18
24
21
1.96
308114--308153
18
2.2
18
90
0
62
7
7
17
67
1.38
308120--308160
18
2.3
18
100
0
82
4
7
17
70
1.28
310078--310103
11
2.4
11
100
0
52
34
26
7
30
1.85
325766--325805
9
4.8
9
82
11
50
55
0
0
45
0.99

Tables:   1   2

The End!