Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007947.1 Hibiscus syriacus cultivar Beakdansim tig00110369_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  254465

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
243449--243521
23
3.2
23
82
7
85
34
5
20
39
1.76
243879--243943
23
2.8
23
90
0
94
35
7
18
38
1.80
244147--244183
18
2.1
18
89
0
56
32
5
10
51
1.60
248477--248511
2
17.5
2
100
0
70
51
0
0
48
1.00
248485--248596
60
1.9
58
82
10
138
58
3
3
34
1.33
248569--248604
18
2.1
18
89
5
56
66
2
5
25
1.27
249823--250326
106
4.8
106
87
4
704
22
19
24
34
1.96
249823--250324
210
2.4
207
87
5
699
22
19
23
34
1.96
250177--250491
162
2.0
157
85
6
425
25
18
22
33
1.96
251378--251453
36
2.1
37
92
7
129
36
15
23
23
1.94
251941--251974
16
2.0
18
88
11
54
41
32
8
17
1.80
253010--253061
23
2.3
22
83
12
61
0
13
7
78
0.94

Tables:   1   2

The End!