Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01007994.1 Hibiscus syriacus cultivar Beakdansim tig00110444_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  788627

Tables:   1   2   3   4   

This is table  4  of  4  ( 367 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758536--758758
107
2.1
105
94
3
385
52
9
11
26
1.68
759551--759626
37
2.1
37
82
0
89
30
27
17
25
1.97
769359--769398
20
1.9
20
85
10
53
27
22
27
22
1.99
773567--773603
17
2.1
18
85
14
51
32
16
10
40
1.83
784936--785476
285
1.9
285
92
0
922
44
8
12
33
1.73
785664--785703
21
1.9
21
85
10
55
40
0
2
57
1.12
788348--788497
74
2.0
74
98
0
291
20
20
31
27
1.98

Tables:   1   2   3   4

The End!