Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008020.1 Hibiscus syriacus cultivar Beakdansim tig00110488_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  406994

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350361--350401
21
1.9
21
85
5
55
46
12
4
36
1.63
354391--354472
17
4.8
17
71
11
69
28
12
13
46
1.79
354391--354472
34
2.4
34
80
11
105
28
12
13
46
1.79
354461--354541
17
4.8
17
74
8
60
37
14
4
43
1.68
354934--354988
25
2.2
25
93
0
92
34
20
20
25
1.96
357334--357666
180
1.8
178
81
11
410
40
11
11
36
1.77
359140--359177
18
2.1
19
85
14
53
57
10
0
31
1.32
360830--361262
196
2.2
195
82
6
525
46
9
6
37
1.61
373973--374013
21
2.0
21
85
0
55
60
0
7
31
1.24
378095--378140
15
3.1
15
87
6
67
15
21
0
63
1.31
379212--379259
20
2.5
20
89
3
71
37
10
6
45
1.64
380499--380532
17
2.0
17
94
0
59
17
26
11
44
1.83
381008--381039
15
2.1
16
94
5
57
18
21
0
59
1.38
387819--387874
3
19.3
3
80
7
62
64
0
1
33
1.04
387819--387873
14
3.9
14
79
11
58
65
0
1
32
1.03
391993--392042
24
2.0
25
88
3
75
56
12
18
14
1.68
403122--403160
20
1.9
21
84
5
53
79
12
7
0
0.93

Tables:   1   2

The End!