Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008133.1 Hibiscus syriacus cultivar Beakdansim tig00110688_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47300

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8245--8316
30
2.4
30
88
0
99
30
22
20
26
1.98
8304--8416
58
2.0
58
84
8
151
30
22
17
29
1.97
8303--8422
32
4.0
30
73
19
108
31
20
18
29
1.96
13096--13167
30
2.4
30
88
0
99
31
22
20
25
1.98
13159--13281
31
3.9
31
73
8
97
32
19
17
30
1.95
17002--17032
3
10.3
3
100
0
62
32
0
0
67
0.91
19176--19202
7
3.9
7
100
0
54
0
11
0
88
0.50
21757--21788
2
16.0
2
100
0
64
50
0
0
50
1.00
27730--27773
15
2.8
16
83
12
56
61
0
4
34
1.16
29102--29174
16
4.6
16
84
0
74
12
13
27
46
1.79
29109--29200
48
1.9
47
84
2
121
13
13
28
45
1.80
29109--29174
32
2.1
32
85
0
87
10
13
28
46
1.76
30200--30233
15
2.2
16
89
5
52
76
5
0
17
0.98
31821--31963
25
5.8
25
97
0
261
32
13
20
33
1.92
32099--32159
3
21.0
3
90
6
99
67
0
1
31
1.01
32361--32739
87
4.3
87
90
4
517
25
19
28
26
1.98
32421--32646
41
5.3
41
70
14
177
25
19
29
25
1.98
46895--47084
25
7.8
25
93
4
325
32
13
20
34
1.91
46895--47084
49
3.9
50
94
3
325
32
13
20
34
1.91
46895--47090
74
2.7
75
94
4
346
31
13
19
34
1.91
47214--47265
3
17.0
3
92
4
86
65
0
1
32
1.04

Tables:   1

The End!