Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008149.1 Hibiscus syriacus cultivar Beakdansim tig00110715_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  174755

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148284--148364
37
2.2
38
90
2
128
18
12
22
46
1.82
148667--148703
18
2.1
18
89
0
56
51
10
5
32
1.60
149083--149131
25
2.0
25
92
4
82
44
20
8
26
1.79
149197--149263
20
3.3
20
87
0
98
38
22
17
20
1.93
149585--149620
18
2.0
18
94
0
63
16
2
25
55
1.55
151826--151877
24
2.3
23
86
6
70
38
21
19
21
1.94
151997--152031
12
2.9
12
91
0
52
14
0
31
54
1.40
152613--152655
22
2.0
22
86
9
61
30
6
37
25
1.82
152783--152838
20
2.8
20
86
0
85
19
19
23
37
1.94
156141--156202
26
2.4
26
94
0
106
29
24
9
37
1.87
162997--163064
32
2.1
32
86
5
93
29
11
2
55
1.50
165339--165376
19
2.0
19
100
0
76
47
5
10
36
1.61
168066--168111
24
1.9
24
86
8
67
0
13
28
58
1.35
168528--168556
3
10.0
3
92
7
51
34
0
0
65
0.93
168527--168563
14
2.7
14
95
4
67
35
0
0
64
0.94
168562--168591
3
10.3
3
92
7
53
70
0
0
30
0.88
170701--170731
13
2.5
13
94
5
55
45
3
0
51
1.17
174203--174505
44
6.9
43
75
18
195
47
2
8
40
1.49
174225--174510
23
13.0
22
72
19
197
47
3
8
40
1.51
174232--174478
43
5.8
42
74
19
217
46
2
8
41
1.49
174232--174510
21
12.7
21
71
19
153
47
3
8
41
1.49
174440--174520
27
3.1
27
73
19
84
45
3
8
41
1.52

Tables:   1   2

The End!