Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008157.1 Hibiscus syriacus cultivar Beakdansim tig00110724_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  217995

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179828--179876
13
3.6
13
83
8
62
59
10
0
30
1.31
179876--179942
21
3.3
21
64
8
57
70
8
1
19
1.22
182270--182320
6
8.5
6
91
6
77
29
1
68
0
1.00
183627--183665
2
19.5
2
94
0
69
48
0
2
48
1.15
183941--183993
19
2.8
18
83
11
61
50
15
7
26
1.70
183942--183993
20
2.7
19
88
8
70
51
15
7
25
1.69
184144--184185
21
2.0
21
85
0
57
30
9
7
52
1.61
184223--184259
18
2.1
18
85
14
51
59
5
2
32
1.34
185511--185688
90
2.0
90
95
0
320
44
6
11
37
1.67
187619--187656
19
2.0
19
89
0
58
10
31
50
7
1.66
189397--189428
10
3.2
10
90
0
55
18
3
0
78
0.89
198841--198866
1
26.0
1
100
0
52
100
0
0
0
0.00
199668--200336
105
6.5
103
90
3
944
34
24
18
22
1.96
201461--201502
20
2.1
20
90
0
66
9
35
47
7
1.64
202795--202868
30
2.4
31
78
10
80
55
12
6
25
1.61

Tables:   1   2

The End!