Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008186.1 Hibiscus syriacus cultivar Beakdansim tig00110793_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  806808

Tables:   1   2   3   

This is table  3  of  3  ( 295 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
673504--673538
18
1.9
18
94
0
61
17
2
25
54
1.57
676661--676788
20
6.3
20
77
8
107
26
17
25
30
1.98
678906--679221
21
15.3
19
72
16
218
33
23
20
22
1.97
678909--679229
42
7.7
42
90
2
479
34
23
20
21
1.97
679163--679229
19
3.3
19
74
12
62
35
20
22
20
1.96
679225--679273
21
2.3
21
92
0
80
20
20
28
30
1.98
679903--679931
10
2.9
10
100
0
58
31
0
37
31
1.58
681149--681204
21
2.7
21
94
0
94
21
26
25
26
1.99
681242--681290
19
2.7
17
84
9
53
26
20
28
24
1.99
681262--681471
65
3.2
65
76
13
218
26
19
23
30
1.98
687623--687668
22
2.1
22
95
0
83
23
32
23
19
1.97
688173--688244
22
3.3
22
82
5
92
27
20
25
26
1.99
688203--688243
21
2.0
21
95
0
73
26
24
24
24
2.00
695984--696023
19
2.1
19
86
9
55
37
0
0
62
0.95
706610--706650
22
1.9
21
90
5
64
26
0
2
70
0.99
715913--716223
21
14.5
21
80
11
312
29
23
21
25
1.99
715933--716256
174
1.9
174
89
5
512
29
22
21
26
1.99
716232--716306
21
3.6
21
87
0
105
22
20
25
32
1.98
716484--716547
31
2.1
31
91
2
103
50
17
15
17
1.79
728111--728168
11
5.4
11
81
4
73
17
1
22
58
1.47
729646--729846
36
5.6
36
94
0
339
30
24
26
18
1.98
730375--730432
11
5.4
11
81
4
73
17
1
22
58
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
734269--734293
2
12.5
2
100
0
50
48
0
0
52
1.00
737073--737159
25
3.5
25
67
26
60
26
5
3
64
1.32
739936--739986
26
2.0
26
100
0
102
35
9
19
35
1.85
740639--740746
48
2.3
47
93
3
182
26
23
23
26
2.00
740758--740886
51
2.5
51
87
2
170
19
31
33
16
1.94
741168--741233
3
22.0
3
82
11
82
34
0
1
63
1.04
742795--742836
20
2.2
19
86
4
57
33
0
2
64
1.07
742691--742927
120
2.0
117
82
4
289
37
7
8
46
1.63
748171--748197
3
9.0
3
100
0
54
0
0
33
66
0.92
749681--749722
7
6.0
7
81
8
50
14
16
14
54
1.71
749681--749722
15
3.0
14
83
10
50
14
16
14
54
1.71
749781--749835
12
4.3
12
78
13
65
21
12
9
56
1.64
749782--749841
27
2.3
27
88
2
95
21
13
8
56
1.63
751454--751481
2
14.0
2
100
0
56
50
0
0
50
1.00
751783--751846
15
4.4
14
80
7
74
81
0
15
3
0.82
751775--751841
7
9.4
7
76
20
50
82
0
14
2
0.79
754121--754344
114
2.0
114
91
0
367
33
16
20
29
1.94
756998--757077
22
3.6
22
86
0
106
32
13
13
40
1.84
757823--758461
113
5.7
113
94
0
1107
37
16
19
27
1.93
758800--758859
3
20.0
3
80
13
70
35
0
1
63
1.05
760428--760469
20
2.2
19
86
4
57
33
0
2
64
1.07
760324--760560
120
2.0
117
83
4
298
37
7
8
47
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
767025--767136
60
1.9
58
81
7
136
29
24
6
40
1.79
767594--767643
24
2.1
24
85
7
66
54
2
8
36
1.42
767630--767669
21
2.0
20
90
9
64
65
0
12
22
1.26
768751--768780
2
15.0
2
100
0
60
50
0
0
50
1.00
771304--771588
43
6.7
43
86
0
374
23
24
17
34
1.96
776426--776452
13
2.1
13
100
0
54
29
0
37
33
1.58
779389--779523
72
1.9
71
84
1
180
22
22
21
32
1.98
779499--779543
21
2.1
21
95
0
81
13
28
22
35
1.92
784780--784810
16
1.9
16
93
0
53
51
6
0
41
1.27
787768--787802
3
11.7
3
100
0
70
68
0
0
31
0.90
797534--797632
42
2.4
41
83
3
110
37
25
21
16
1.93

Tables:   1   2   3

The End!