Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008191.1 Hibiscus syriacus cultivar Beakdansim tig00110800_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63424

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--124
3
41.0
3
87
12
175
0
33
0
66
0.92
4152--4272
3
40.0
3
83
1
143
40
1
0
57
1.08
4381--4406
13
2.0
13
100
0
52
7
53
15
23
1.67
6302--6359
27
2.2
25
82
11
64
25
3
5
65
1.29
15896--15953
7
8.3
7
76
19
59
82
0
17
0
0.66
15902--15954
11
4.8
12
80
19
62
83
0
16
0
0.66
15901--15948
24
2.1
22
92
7
78
83
0
16
0
0.65
17084--17354
83
3.3
83
96
0
506
26
13
22
36
1.92
18172--19004
113
7.4
113
93
1
1359
36
15
19
28
1.92
19352--19471
3
40.0
3
79
0
132
40
2
0
56
1.13
19352--19471
27
4.3
27
90
3
177
40
2
0
56
1.13
19588--19628
16
2.6
16
92
0
64
9
58
17
14
1.62
20835--20874
12
3.1
13
82
10
55
40
0
0
60
0.97
27163--27216
18
3.3
18
68
24
55
46
1
5
46
1.37
27130--27229
31
3.2
31
83
8
114
42
1
6
51
1.33
27360--27390
2
15.5
2
93
0
53
48
0
0
51
1.00
28183--28212
14
2.1
14
93
0
51
56
0
0
43
0.99
29128--29244
3
39.0
3
78
0
126
41
2
0
56
1.13
29128--29244
27
4.2
27
90
3
171
41
2
0
56
1.13
29361--29401
16
2.6
16
84
0
55
12
58
14
14
1.63
30608--30647
12
3.1
13
82
10
55
40
0
0
60
0.97
32927--32972
10
4.6
10
78
10
58
17
21
28
32
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32925--32963
19
2.0
20
95
5
71
23
20
25
30
1.98
32926--32972
11
4.6
11
77
17
57
19
21
27
31
1.97
32985--33015
13
2.4
13
94
0
53
16
48
19
16
1.81
33041--33116
29
2.6
29
87
0
98
21
9
27
42
1.83
40202--40247
10
4.6
10
84
10
67
15
21
28
34
1.94
40201--40239
19
2.0
20
95
5
71
17
20
25
35
1.95
40260--40290
13
2.4
13
94
0
53
16
48
19
16
1.81
40309--40384
29
2.6
29
87
0
98
21
9
27
42
1.83
50187--50226
21
1.9
21
89
0
62
10
25
40
25
1.86
50208--50270
21
2.9
21
88
4
90
19
25
34
20
1.96
60176--60250
7
10.3
7
81
12
89
84
0
16
0
0.63
60182--60251
12
5.8
12
78
20
74
84
0
15
0
0.63
60176--60252
19
3.9
19
88
10
111
83
0
16
0
0.66
61382--61652
83
3.3
83
96
0
497
26
13
22
37
1.91
62460--63276
112
7.4
114
88
6
1168
36
15
19
28
1.92
62460--63276
331
2.5
330
89
5
1222
36
15
19
28
1.92
62460--63276
219
3.7
221
88
6
1185
36
15
19
28
1.92

Tables:   1

The End!