Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008201.1 Hibiscus syriacus cultivar Beakdansim tig00110821_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  276706

Tables:   1   2   

This is table  2  of  2  ( 148 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
206839--206921
34
2.4
34
100
0
166
38
0
28
32
1.57
212646--212689
21
2.1
21
86
0
61
9
40
15
34
1.79
213735--213894
65
2.5
63
84
8
189
30
23
19
26
1.98
231027--231092
33
2.0
33
100
0
132
30
42
6
21
1.77
233791--233842
20
2.5
21
81
3
61
40
19
23
17
1.91
233831--233931
20
5.0
20
78
7
96
33
24
16
24
1.96
233828--233944
61
1.9
61
82
0
144
35
24
16
23
1.95
233893--233945
20
2.7
20
90
0
79
26
28
18
26
1.98
234182--234246
21
3.1
21
95
0
121
40
30
6
23
1.79
234025--234425
219
1.8
219
98
0
775
31
37
9
21
1.86
234720--234761
19
2.2
19
86
0
57
50
28
16
4
1.66
234757--234835
19
4.1
19
75
3
77
16
21
16
45
1.85
236154--236211
14
3.9
14
79
16
71
10
17
24
48
1.78
236130--236227
33
3.0
33
95
3
180
11
18
22
47
1.80
236212--236266
20
2.8
19
83
8
65
16
23
23
36
1.94
236748--236792
18
2.5
18
88
0
72
13
15
44
26
1.83
238109--238167
20
3.0
20
82
0
64
44
22
16
16
1.87
238660--238732
20
3.7
20
94
0
128
26
17
28
27
1.98
238782--238834
20
2.7
20
96
0
97
18
20
18
41
1.91
239952--240022
30
2.4
30
87
0
97
33
14
28
23
1.94
240058--240083
13
2.0
13
100
0
52
15
53
15
15
1.73
240129--240193
24
2.6
26
79
16
75
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
240147--240186
19
2.1
19
85
0
53
55
0
0
45
0.99
240191--240244
12
4.6
12
81
4
65
24
46
16
12
1.82
250919--250964
24
2.0
23
83
8
58
63
0
6
30
1.20
251308--251343
17
2.0
19
89
10
58
50
0
0
50
1.00
270521--270590
35
2.0
35
97
0
131
41
2
7
48
1.45
273571--273596
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1   2

The End!