Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008249.1 Hibiscus syriacus cultivar Beakdansim tig00110901_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  175145

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
169452--169713
11
23.3
11
67
23
74
45
3
2
48
1.32
169573--169686
6
19.3
6
72
15
62
49
2
0
47
1.21
169536--169686
35
4.6
33
77
17
131
47
2
1
47
1.27
169516--169708
21
9.3
21
68
24
83
47
2
1
48
1.25
169553--169716
69
2.4
70
79
18
177
48
1
1
48
1.20
170025--170100
39
1.9
39
84
10
102
35
11
18
34
1.87
170115--170184
14
5.3
13
81
13
74
10
15
22
51
1.73
170116--170168
24
2.2
25
80
16
67
9
15
24
50
1.73
171260--171295
16
2.2
16
100
0
72
5
13
25
55
1.60

Tables:   1   2

The End!