Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008254.1 Hibiscus syriacus cultivar Beakdansim tig00110907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  246921

Tables:   1   2   

This is table  2  of  2  ( 145 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231914--231966
14
3.8
14
90
5
81
41
0
5
52
1.25
231912--231966
28
2.0
28
92
7
94
41
0
5
52
1.24
233226--233357
11
12.8
10
67
21
51
20
2
3
74
1.06
233271--233308
17
2.2
17
86
9
51
18
0
2
78
0.86
237111--237348
100
2.4
98
89
5
331
32
17
18
30
1.95
238445--238865
84
5.0
84
83
2
515
30
24
19
24
1.98
238444--238865
168
2.5
168
88
1
607
30
24
19
24
1.98
238772--238968
103
1.9
103
91
0
322
33
24
17
24
1.96
238601--239134
269
2.0
270
86
3
763
31
24
18
25
1.97
238872--239675
84
9.6
84
82
3
895
33
23
18
24
1.97
240218--240257
2
20.0
2
94
0
71
47
0
2
50
1.14
240277--240339
25
2.5
24
73
16
65
46
1
7
44
1.42
240303--240489
36
5.1
38
68
21
105
49
3
5
41
1.43
240391--240542
36
4.3
35
78
11
132
50
2
4
42
1.37
240419--240507
37
2.4
37
85
5
110
53
3
2
40
1.30
240372--240540
32
5.0
34
72
12
127
49
3
4
43
1.39
240372--240540
36
5.0
33
71
15
123
49
3
4
43
1.39
240391--240582
68
2.8
71
76
12
186
49
3
5
41
1.42
240555--240615
20
3.2
20
77
11
65
45
0
4
49
1.23
240588--240639
17
3.1
17
82
15
63
40
0
1
57
1.10
241862--241911
3
16.7
3
91
8
84
32
0
0
68
0.90
241877--241941
21
3.2
20
82
6
69
26
9
0
64
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241964--242009
19
2.2
22
88
11
71
15
0
4
80
0.86
241964--242059
10
8.8
10
67
20
50
14
2
5
78
1.02
241964--242061
11
8.5
11
67
15
56
15
2
5
77
1.03

Tables:   1   2

The End!