Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008287.1 Hibiscus syriacus cultivar Beakdansim tig00110950_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59462

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7403--7489
3
28.0
3
81
6
102
59
1
0
39
1.05
8684--8736
21
2.5
21
96
0
97
45
5
22
26
1.74
11885--12034
78
1.9
78
91
2
248
30
20
20
28
1.97
16659--16705
2
23.5
2
100
0
94
51
0
0
48
1.00
19280--19358
22
3.6
22
84
6
115
27
18
21
31
1.97
19280--19365
44
2.0
44
92
0
145
26
20
22
30
1.98
19607--19668
30
2.1
30
81
0
70
46
11
9
32
1.72
20651--20776
48
2.7
47
81
11
136
30
15
22
31
1.95
23416--23491
22
3.5
22
100
0
152
30
22
23
23
1.99
25395--25433
19
2.1
19
95
0
69
20
38
15
25
1.92
25381--25560
64
2.8
64
80
4
202
28
26
16
28
1.97
31254--31309
22
2.7
21
83
10
62
30
23
17
28
1.97
32839--32882
21
2.1
21
86
0
61
9
36
15
38
1.80
33891--33941
19
2.7
19
80
19
63
23
33
15
27
1.95
33889--34049
65
2.5
65
84
5
202
30
24
15
29
1.96
35347--35472
61
2.1
61
96
0
234
39
14
13
32
1.85
38892--39051
65
2.5
65
83
10
188
30
16
21
31
1.96
38892--39099
65
3.2
65
73
17
182
28
16
22
32
1.96
40605--40636
13
2.5
13
95
5
57
6
37
0
56
1.25
41601--41630
13
2.2
14
94
5
53
40
13
26
20
1.89
42035--42187
22
7.0
22
85
1
191
28
20
22
28
1.99
42035--42187
44
3.5
44
87
4
211
28
20
22
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50163--50235
21
3.5
21
92
3
121
32
8
26
32
1.86

Tables:   1

The End!