Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008304.1 Hibiscus syriacus cultivar Beakdansim tig00110990_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  283871

Tables:   1   2   

This is table  2  of  2  ( 145 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
211479--211631
37
4.2
37
88
1
236
33
22
19
24
1.97
211479--211621
73
2.0
73
92
2
243
32
22
20
23
1.98
211802--211826
13
1.9
13
100
0
50
32
0
0
68
0.90
211800--211844
19
2.4
19
88
0
63
31
2
0
66
1.04
224135--224172
10
3.8
10
89
0
58
39
0
28
31
1.57
224749--224805
29
2.0
29
82
6
71
42
5
1
50
1.35
234820--234902
24
3.5
23
65
26
57
46
8
2
42
1.47
234793--234935
48
3.0
48
98
0
277
45
8
2
43
1.48
234846--234921
24
3.3
22
66
20
64
47
6
1
44
1.37
238876--238924
20
2.5
20
86
0
62
32
22
14
30
1.93
245883--245940
21
2.8
21
79
10
66
12
24
39
24
1.89
249744--249783
21
1.9
21
85
10
55
35
10
2
52
1.48
253323--253396
37
2.0
37
97
0
139
50
6
5
37
1.52
253681--253705
13
1.9
13
100
0
50
24
24
12
40
1.88
258640--258765
58
2.1
60
82
8
152
35
9
17
37
1.82
264907--264963
28
2.0
28
100
0
114
61
7
17
14
1.54
267304--267344
3
14.0
3
80
14
50
36
0
0
63
0.95
269478--269528
18
2.9
17
72
18
50
25
0
1
72
0.95
274189--274239
6
8.3
6
85
10
68
80
0
19
0
0.71
276434--276689
83
3.1
83
97
0
467
28
14
20
35
1.93
278915--278994
40
2.0
40
95
0
142
33
16
21
28
1.95
279399--279449
22
2.3
22
93
0
84
35
11
15
37
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279849--280514
113
6.0
113
88
4
895
38
13
18
29
1.89
280920--281627
75
9.4
76
93
2
1182
22
20
20
35
1.96
281756--281796
3
14.0
3
80
14
50
36
0
0
63
0.95

Tables:   1   2

The End!