Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008329.1 Hibiscus syriacus cultivar Beakdansim tig00111037_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  291406

Tables:   1   2   

This is table  2  of  2  ( 141 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
245158--245207
21
2.3
21
82
6
55
54
2
8
36
1.42
248111--248223
51
2.2
51
98
0
217
44
5
25
24
1.75
249692--249742
19
2.6
19
87
3
66
35
33
13
17
1.89
249692--249784
20
4.7
20
80
6
91
32
31
13
22
1.93
249899--249986
37
2.4
36
84
5
122
23
14
22
38
1.92
250121--250251
20
6.4
20
79
6
129
28
12
26
32
1.93
250121--250251
41
3.2
41
80
7
142
28
12
26
32
1.93
250282--250349
20
3.4
20
79
0
82
30
10
25
33
1.89
252045--252075
2
15.5
2
100
0
62
48
0
0
51
1.00
256561--256596
18
2.0
18
94
0
63
30
16
30
22
1.96
257732--258653
122
7.6
121
83
6
1059
29
16
9
44
1.79
257743--258653
358
2.5
361
83
5
1167
29
16
9
44
1.80
257732--258655
244
3.8
242
85
5
1240
29
16
9
44
1.80
261024--261067
2
22.0
2
100
0
88
50
0
0
50
1.00
269370--269407
20
1.9
20
94
0
67
52
2
7
36
1.45
274531--274564
8
4.2
8
84
0
50
38
5
0
55
1.24
274834--274972
55
2.6
54
84
5
174
23
25
20
30
1.98
274897--275485
55
10.7
55
86
3
744
27
25
15
31
1.96
274975--275485
164
3.1
164
91
2
783
28
25
14
30
1.95
276487--276542
7
7.5
8
76
17
50
10
8
0
80
0.91
291129--291189
28
2.2
28
100
0
122
27
11
9
50
1.70

Tables:   1   2

The End!