Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000833.1 Hibiscus syriacus cultivar Beakdansim tig00001611_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77125

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5182--5224
21
2.0
21
82
8
52
20
2
20
55
1.54
7698--7737
13
3.1
13
88
0
62
25
17
22
35
1.95
9663--9696
2
16.5
2
87
6
50
47
0
5
47
1.26
11630--11797
91
1.8
91
87
2
248
48
11
13
26
1.77
13441--13487
21
2.3
22
82
14
64
29
14
17
38
1.89
16308--16398
4
24.5
4
67
14
52
50
0
0
49
1.00
16308--16398
6
16.3
6
76
15
52
50
0
0
49
1.00
16317--16391
39
1.9
39
94
0
132
50
0
0
49
1.00
26977--27034
28
2.0
29
83
3
73
41
17
17
24
1.90
33147--33184
2
19.0
2
100
0
76
50
0
0
50
1.00
36593--36648
24
2.3
24
96
0
103
28
0
32
39
1.57
49213--49426
42
5.1
41
74
10
184
32
20
21
25
1.97
49224--49469
42
5.9
40
71
10
154
32
20
20
26
1.97
49214--49431
83
2.6
82
84
2
301
33
19
21
26
1.97
49412--49668
41
6.2
41
83
8
292
33
17
19
30
1.95
59087--59230
21
6.9
21
80
3
128
40
20
36
2
1.67
59551--59947
43
9.3
43
73
9
226
32
23
17
26
1.97
60363--60390
2
14.0
2
100
0
56
50
0
0
50
1.00
60756--60809
25
2.0
27
86
13
76
59
3
14
22
1.51
64998--65042
14
3.2
14
90
0
63
48
8
6
35
1.61
65003--65050
14
3.5
13
80
11
51
43
10
6
39
1.64
70523--70560
19
2.0
19
94
0
67
7
47
13
31
1.71

Tables:   1

The End!