Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008344.1 Hibiscus syriacus cultivar Beakdansim tig00111071_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  332991

Tables:   1   2   3   

This is table  3  of  3  ( 253 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
277430--277477
5
10.2
5
84
13
50
79
2
0
18
0.84
277506--277602
35
2.6
36
82
8
106
50
5
1
43
1.31
277603--277652
25
2.0
25
88
7
75
40
10
8
42
1.68
277629--277855
38
6.2
37
77
14
172
44
9
3
43
1.52
277693--277762
31
2.3
31
87
5
97
45
8
2
42
1.49
277657--277792
69
1.9
70
85
8
188
44
8
2
44
1.50
277924--277981
2
29.0
2
100
0
116
50
0
0
50
1.00
277969--278753
391
2.0
392
95
1
1414
35
10
9
45
1.70
288520--288638
56
2.1
57
95
3
215
54
7
11
26
1.63
289966--290075
58
1.9
57
86
5
150
33
13
13
39
1.84
296727--297390
105
6.4
105
95
2
1169
23
18
24
32
1.97
319607--319652
22
2.1
22
100
0
92
54
21
8
15
1.68
325798--325837
21
1.9
21
89
0
62
22
10
27
40
1.86

Tables:   1   2   3

The End!