Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008378.1 Hibiscus syriacus cultivar Beakdansim tig00111138_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  241419

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234849--234976
44
3.0
43
77
17
126
46
3
3
46
1.37
234890--235130
37
6.4
37
76
9
211
43
6
5
44
1.52
234922--235128
75
2.7
78
84
9
268
43
7
5
43
1.54
235126--235156
15
2.1
15
93
0
53
61
3
0
35
1.12
236058--236212
65
2.4
65
83
7
197
34
13
23
28
1.93
236218--236506
96
3.0
94
87
6
373
36
11
19
32
1.87
236312--236388
29
2.6
30
81
10
86
32
10
20
36
1.87
236372--236457
36
2.4
36
90
0
127
40
13
20
24
1.89
236490--236656
76
2.2
75
78
7
178
38
16
19
25
1.92
236473--236660
37
5.0
39
80
6
181
38
15
19
27
1.91
236693--236838
72
2.0
73
85
6
199
39
15
17
28
1.89
237912--238109
95
2.1
95
87
3
283
32
18
15
32
1.93

Tables:   1   2

The End!