Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008563.1 Hibiscus syriacus cultivar Beakdansim tig00111473_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  653500

Tables:   1   2   3   

This is table  3  of  3  ( 252 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
608622--608653
2
15.5
2
93
6
55
50
0
3
46
1.17
609022--609062
13
3.3
13
81
18
52
19
2
0
78
0.87
609031--609072
19
2.2
20
87
8
61
16
7
0
76
1.00
637223--637309
44
2.0
44
95
0
156
28
19
13
37
1.90
642062--642167
28
3.8
26
79
10
104
55
0
5
37
1.30
642074--642209
57
2.4
56
83
13
154
53
0
6
38
1.32
642073--642227
28
5.3
29
75
14
126
51
1
6
40
1.36
643999--644040
20
2.1
21
86
8
61
47
2
19
30
1.62
644154--644564
190
2.2
189
86
5
553
45
9
5
38
1.61
647153--647258
52
2.0
52
94
0
185
54
16
10
17
1.69
651287--651344
27
2.1
28
84
9
75
46
6
12
34
1.68
653355--653412
24
2.4
24
100
0
116
31
20
8
39
1.83

Tables:   1   2   3

The End!