Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008573.1 Hibiscus syriacus cultivar Beakdansim tig00111502_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  313404

Tables:   1   2   

This is table  2  of  2  ( 133 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247412--247801
185
2.1
185
91
1
631
44
7
3
44
1.50
251450--251503
25
2.2
25
90
6
83
25
3
11
59
1.48
257104--257143
17
2.4
17
100
0
80
47
30
5
17
1.69
271664--271722
29
2.0
29
93
0
100
15
33
27
23
1.95
273587--273622
16
2.2
16
90
0
54
52
16
5
25
1.65
280147--280172
8
3.2
8
100
0
52
0
61
0
38
0.96
288186--288243
28
2.1
28
93
0
98
50
6
8
34
1.60
292339--292656
84
3.8
83
79
12
349
27
25
19
27
1.99
292348--292680
171
1.9
171
88
1
497
28
25
19
26
1.99
301890--302088
98
2.0
100
90
5
316
36
18
16
29
1.93
309367--309406
11
3.6
11
86
6
55
80
10
7
2
1.00
309370--309423
10
5.4
10
80
6
56
75
12
9
1
1.11
309369--309423
11
5.4
10
76
12
51
76
12
9
1
1.10

Tables:   1   2

The End!