Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000858.1 Hibiscus syriacus cultivar Beakdansim tig00001663_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  346567

Tables:   1   2   

This is table  2  of  2  ( 132 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
292220--292298
23
3.3
23
68
23
65
35
5
15
44
1.68
292448--292504
20
2.8
20
81
2
69
45
31
0
22
1.53
292454--292518
34
1.9
34
87
0
94
47
29
0
23
1.52
300161--300219
2
29.5
2
100
0
118
0
49
0
50
1.00
314453--314480
10
2.8
10
100
0
56
32
10
21
35
1.88
317843--318233
211
1.9
210
84
2
525
29
23
11
34
1.91
320389--320424
18
2.0
18
100
0
72
50
5
22
22
1.70
331123--331753
317
2.0
314
98
0
1217
37
20
15
26
1.92
336614--336654
20
2.0
20
100
0
82
9
19
29
41
1.83
336616--336662
20
2.3
20
92
0
76
8
21
27
42
1.81
337446--337493
24
2.0
24
100
0
96
29
29
8
33
1.86
345298--345327
12
2.5
12
100
0
60
33
43
16
6
1.74

Tables:   1   2

The End!