Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008593.1 Hibiscus syriacus cultivar Beakdansim tig00111542_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1058705

Tables:   1   2   3   4   5   

This is table  5  of  5  ( 494 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1033298--1033373
30
2.5
30
89
0
107
26
26
13
34
1.93
1041129--1041171
20
2.2
20
86
0
59
53
0
0
46
1.00
1041158--1041202
22
2.0
23
87
8
67
57
0
0
42
0.98
1044079--1044682
138
4.4
138
92
0
967
23
21
20
33
1.97
1044728--1044813
23
3.7
23
90
6
138
48
0
17
33
1.47
1044777--1044898
63
1.9
63
96
0
226
39
0
22
36
1.60
1044840--1044889
23
2.2
23
82
7
57
48
0
18
34
1.48
1044964--1044993
14
2.1
14
93
0
51
26
0
13
60
1.34
1045246--1045306
21
2.9
21
90
4
88
27
19
32
19
1.96
1045288--1045378
42
2.2
42
79
0
101
29
18
29
21
1.97
1047069--1047116
15
2.8
18
75
18
57
54
0
0
45
0.99
1047068--1047123
17
3.4
17
73
14
62
55
0
0
44
0.99
1049261--1049342
29
2.8
29
90
1
119
32
13
10
42
1.79
1053943--1054024
29
2.8
29
92
1
128
32
14
10
41
1.81

Tables:   1   2   3   4   5

The End!