Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008596.1 Hibiscus syriacus cultivar Beakdansim tig00111545_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  280553

Tables:   1   2   

This is table  2  of  2  ( 128 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236158--236278
64
1.9
64
84
5
165
24
17
20
37
1.94
249287--249315
13
2.1
14
93
6
51
6
24
20
48
1.74
253202--253262
22
2.8
22
73
9
70
37
19
14
27
1.91
270843--271627
416
1.9
403
86
5
1119
29
15
17
36
1.91
274743--274776
17
2.0
17
88
11
52
20
17
11
50
1.77
275059--275100
21
2.1
20
91
8
68
50
0
19
30
1.48
275730--276107
157
2.4
157
86
5
514
48
7
16
26
1.72
276226--276250
9
2.8
9
100
0
50
44
24
12
20
1.85

Tables:   1   2

The End!