Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008606.1 Hibiscus syriacus cultivar Beakdansim tig00111562_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  365242

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
311297--311554
6
43.2
6
99
0
509
33
0
16
50
1.46
320825--320883
30
2.0
30
96
0
109
49
13
5
32
1.64
325187--325284
49
2.0
49
93
0
169
35
12
21
30
1.90
327524--327564
20
2.0
20
86
9
57
51
0
2
46
1.14
335564--335613
22
2.3
23
80
16
63
30
2
8
60
1.37
338623--338652
15
2.0
15
93
0
51
43
13
16
26
1.85
342425--342456
6
5.3
6
100
0
64
31
0
68
0
0.90
343426--343500
27
2.8
27
100
0
150
44
2
10
42
1.53
352518--352652
69
2.0
69
95
0
243
27
40
19
13
1.89
352893--352975
29
2.8
30
78
7
71
42
8
16
32
1.79
358835--358941
54
2.0
55
88
1
162
42
12
23
21
1.86
358843--358964
55
2.2
54
82
4
138
44
15
21
18
1.87
359617--359759
67
2.1
70
89
7
222
37
13
25
23
1.92
364475--364571
33
2.8
36
76
13
103
37
23
17
21
1.94
364960--365198
54
4.5
54
88
3
362
35
20
25
18
1.95

Tables:   1   2

The End!