Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008749.1 Hibiscus syriacus cultivar Beakdansim tig00111840_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  379273

Tables:   1   2   3   

This is table  3  of  3  ( 257 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
342321--342773
225
2.0
225
98
0
870
31
15
13
40
1.85
344289--344328
11
3.5
11
86
10
53
32
2
0
65
1.06
346486--346533
24
2.0
25
84
12
64
52
2
2
43
1.24
347421--347473
3
18.0
3
84
3
63
26
1
1
69
1.09
347928--347962
11
3.1
11
88
8
52
82
5
11
0
0.82
360947--361011
16
4.0
16
76
8
51
76
0
12
10
1.01
360963--361011
25
2.0
25
84
8
64
79
0
10
10
0.93
361945--362321
43
8.7
43
71
12
268
26
29
20
23
1.99
361956--362242
89
3.2
89
96
1
506
25
28
20
25
1.99
362573--362625
3
18.0
3
84
3
63
26
1
1
69
1.09
363079--363116
19
2.0
19
85
10
51
81
5
13
0
0.85
371472--371536
29
2.2
29
86
8
87
29
9
18
43
1.81
371484--371547
29
2.2
29
91
5
103
29
7
17
45
1.76
373275--373307
15
2.1
16
88
5
50
51
18
0
30
1.46
373888--373948
29
2.1
30
81
9
72
49
8
8
34
1.62
377003--377048
12
3.6
12
81
16
56
45
17
19
17
1.85
377009--377049
12
3.1
13
80
19
57
46
14
17
21
1.84

Tables:   1   2   3

The End!