Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008757.1 Hibiscus syriacus cultivar Beakdansim tig00111849_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  497375

Tables:   1   2   3   

This is table  3  of  3  ( 251 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
477263--477740
126
3.8
126
97
0
904
32
20
25
21
1.97
477808--477848
8
5.2
8
82
5
57
36
29
0
34
1.58
480841--480878
13
3.0
13
88
3
60
44
0
0
55
0.99
480891--480949
23
2.7
23
94
5
104
45
11
3
38
1.58
482023--482082
13
4.8
13
78
12
63
28
0
1
70
0.97
482023--482069
21
2.2
21
92
0
76
27
0
2
70
0.99
482041--482076
16
2.2
16
100
0
72
30
0
0
69
0.89
482023--482086
21
3.3
21
75
20
75
26
0
1
71
0.94
482336--482405
13
5.4
13
77
13
54
70
1
1
27
1.05
492993--493028
18
1.9
19
88
5
56
55
0
5
38
1.23
495703--495749
21
2.2
22
81
11
62
48
4
2
44
1.34

Tables:   1   2   3

The End!