Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000881.1 Hibiscus syriacus cultivar Beakdansim tig00001714_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53049

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1391--1424
14
2.4
14
85
0
50
35
2
2
58
1.28
8114--8162
22
2.2
22
85
7
64
34
10
2
53
1.47
11661--11741
24
3.4
23
79
3
72
24
11
19
44
1.83
15887--15954
24
2.8
24
86
0
100
25
16
17
41
1.89
18172--18202
16
1.9
16
100
0
62
32
29
12
25
1.93
25177--25819
318
2.0
321
93
4
1124
30
20
24
25
1.99
29495--29529
12
2.9
12
95
0
61
28
25
14
31
1.95
31326--31366
21
2.0
21
86
13
59
39
7
2
51
1.43
44392--44445
3
18.7
3
81
14
69
62
0
0
37
0.95
44392--44446
22
2.5
23
91
5
87
61
0
0
38
0.96
48710--49332
4
161.5
4
90
7
1015
26
0
23
49
1.55

Tables:   1

The End!