Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01008881.1 Hibiscus syriacus cultivar Beakdansim tig00112127_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  608427

Tables:   1   2   3   

This is table  3  of  3  ( 252 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
581272--581337
2
33.5
2
96
3
125
50
0
0
50
1.00
586728--586802
37
2.0
37
86
0
105
22
29
8
40
1.82
586906--587003
45
2.2
45
87
3
135
30
23
5
40
1.76
592613--592665
20
2.7
19
82
8
61
22
13
33
30
1.92
594420--594500
34
2.4
34
100
0
162
44
12
13
29
1.80
598678--598783
54
2.0
51
94
5
185
28
40
1
29
1.67
599880--599952
37
2.0
37
83
5
94
35
34
13
16
1.88
601739--601794
28
2.0
28
93
3
96
30
21
21
26
1.98
602903--602955
25
2.1
25
85
0
70
43
3
5
47
1.45
602928--602984
21
2.6
21
86
8
69
43
1
7
47
1.40
602998--603045
18
2.5
19
73
10
53
39
2
10
47
1.49
603042--603087
22
2.2
21
84
7
58
43
6
4
45
1.49

Tables:   1   2   3

The End!